Opportunistic pathogens evolve mostly harmlessly in healthy humans

Staphylococcus_aureus_VISA_2

Humans interact with bacteria almost every minute of our lives. Of the millions of these interactions, only a handful result in disease, and some bacteria only cause infections under certain conditions. In a recent PLOS ONE study, researchers probe these healthy human-bacterial relations  in one particularly notorious pathogen as it spends the majority of its time in our bodies, doing no harm.

Staphylococcus aureus can cause endocarditis, toxic shock syndrome and other diseases, killing approximately 1 in 100,000 infected people in the US each year. Strains like MRSA have also evolved to carry multiple antibiotic resistance genes, making infections extremely difficult to treat. If human-bacterial interactions are to be described as a ‘genetic arms race’, it may be tempting to cast S. aureus as an enemy that carries every available genetic weapon.

Yet despite a few sporadic skirmishes, the majority of our interactions remain peaceful, as these bacteria thrive in healthy human hosts.  In fact, about a third of healthy adults carry S. aureus in our noses at some point in our lives.  In the article, researchers analyzed the genetic changes in S. aureus carried in such hosts by sequencing the genomes of 130 strains of S. aureus from the nasal passages of 13 healthy adults, five of whom carried strains of MRSA (which is often harmless when carried nasally). Despite the arms race metaphors, they found that S. aureus strains in healthy hosts are not incessantly beefing up their genetic arsenal of antibiotic resistance or pathogenesis genes.

They found bacterial genomes were changed by processes of ‘micro-mutation’, i.e.: small bits of genetic material being added or removed, or changes in a single letter in the genetic code. Large insertions and deletions (macro-mutation) were also common, as were changes caused by bacteria-infecting viruses or small, independently moving rings of DNA called plasmids. Overall, the constant changes in S. aureus genomes were geared toward keeping bacterial genomes healthy by clearing erroneous or harmful mutations. Only on rare occasions did these bacteria acquire distinctive surface proteins or an enterotoxin that could alter their pathogenic potential. In addition, their research also analyzed changes in specific genes used to assess bacterial diversity and relatedness, and developed a new method to detect transmission of bacterial strains among human carriers. Read the full study to learn more about these interesting results.

Many of the changes identified in this study may not directly increase the virulence of disease-causing S. aureus. However, previous work by these researchers demonstrated that mutations arising in bacteria carried by healthy hosts may play an important role in tipping the balance between human health and disease. Here, the authors begin to paint a picture of what these mutations are and how they may occur.

Citation: Golubchik T, Batty EM, Miller RR, Farr H, Young BC, et al. (2013) Within-Host Evolution of Staphylococcus aureus during Asymptomatic Carriage. PLoS ONE 8(5): e61319. doi:10.1371/journal.pone.0061319

Image: Scanning electron micrograph of S.aureus with increased resistance to vancomycin. Credit CDC/ Matthew J. Arduino, DRPH

 

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PLOS ONE Goes to the Mile-High City for ASM 2013

Bacillus anthracis - three color

PLOS ONE is looking forward to connecting with our editors, authors, reviewers, and readers at the 113th General Meeting of the American Society for Microbiology in Denver, Colorado. Representing PLOS ONE will be Damian Pattinson, Executive Editor; Lindsay Kelley, Editorial Board Manager; Camron Assadi, Product Marketing Manager; and myself (Meg Byrne, Associate Editor).

PLOS ONE continues to publish many high-profile papers in microbiology. Some of the most highly cited articles published since 2011 include a genomic characterization of a deadly Escherichia coli strain; a “field guide” to more than 3000 isolates of methicillin-resistant Staphylococcus aureus found around the world; the genome sequence of a novel ammonia-oxidizing archaeon (a member of the recently discovered third domain of life); and an analysis of the lung microbiomes in smokers with chronic obstructive pulmonary disease, smokers without COPD, and non-smokers.

In the last month, a number of publications have caught our readers’ eyes.  These include an article showing that a breast-milk protein can help fight antibiotic-resistant bacteria; a report of a new antibiotic developed from a bacteria-killing virus; a super-phylogeny of the over 3000 bacterial and archaeal genomes that have been sequenced to date; and an analysis of the immune response to a bacterial lung infection in a 500-year-old mummy.

Come find us at the meeting: We’d love to hear your thoughts about PLOS and science publishing, in general. We’ll be at booth #350 from Sunday, May 19th through Tuesday, May 21st.

For authors: Let us show you your article level metrics (ALMs) and give you a special author t-shirt.  We can also show off one of our latest features, Relative Metrics (Beta), which allows you to compare your paper’s usage to the average usage of articles in related subject areas.

For prospective authors: Please come ask us any questions you have about publishing in PLOS ONE and the family of PLOS journals. We can enumerate the many advantages of publishing in our open access journals, including free readership rights, reuse and remixing rights, unrestricted copyright, automatic posting of the article, and machine accessibility of the published article.

For PLOS ONE academic editors: We are looking forward to seeing you at our Editorial Board Reception on Monday May 20th from 5:30 to 7:30 PM at the Hyatt Regency.  We would love to fill you in on our plans for the future, get your feedback, and say a huge “Thank you!” It’s also a great opportunity to meet other academic editors. Please contact Lindsay Kelley or Camron Assadi for further information.

Also, PLOS Biology is looking forward to catching up with their academic editors at a “Meet the Editors” event on Sunday May 19th between 12:30 and 2:30 PM at the PLOS Booth.

We’re looking forward to seeing many microbiologists in Denver and discussing the small but mighty microbe.

Image

Bacillus anthracis with the cell wall labelled red, the division septa labelled green, and the DNA labelled blue (Schuch et al. PLOS ONE 2013).

References

Blainey PC, Mosier AC, Potanina A, Francis CA, Quake SR (2011) Genome of a Low-Salinity Ammonia-Oxidizing Archaeon Determined by Single-Cell and Metagenomic Analysis. PLoS ONE 6(2): e16626. doi:10.1371/journal.pone.0016626

Corthals A, Koller A, Martin DW, Rieger R, Chen EI, et al. (2012) Detecting the Immune System Response of a 500 Year-Old Inca Mummy. PLoS ONE 7(7): e41244. doi:10.1371/journal.pone.0041244

Erb-Downward JR, Thompson DL, Han MK, Freeman CM, McCloskey L, et al. (2011) Analysis of the Lung Microbiome in the “Healthy” Smoker and in COPD. PLoS ONE 6(2): e16384. doi:10.1371/journal.pone.0016384

Lang JM, Darling AE, Eisen JA (2013) Phylogeny of Bacterial and Archaeal Genomes Using Conserved Genes: Supertrees and Supermatrices. PLoS ONE 8(4): e62510. doi:10.1371/journal.pone.0062510

Marks LR, Clementi EA, Hakansson AP (2013) Sensitization of Staphylococcus aureus to Methicillin and Other Antibiotics In Vitro and In Vivo in the Presence of HAMLET. PLoS ONE 8(5): e63158. doi:10.1371/journal.pone.0063158

Mellmann A, Harmsen D, Cummings CA, Zentz EB, Leopold SR, et al. (2011) Prospective Genomic Characterization of the German Enterohemorrhagic Escherichia coli O104:H4 Outbreak by Rapid Next Generation Sequencing Technology. PLoS ONE 6(7): e22751. doi:10.1371/journal.pone.0022751

Monecke S, Coombs G, Shore AC, Coleman DC, Akpaka P, et al. (2011) A Field Guide to Pandemic, Epidemic and Sporadic Clones of Methicillin-Resistant Staphylococcus aureus. PLoS ONE 6(4): e17936. doi:10.1371/journal.pone.0017936

Schuch R, Pelzek AJ, Raz A, Euler CW, Ryan PA, et al. (2013) Use of a Bacteriophage Lysin to Identify a Novel Target for Antimicrobial Development. PLoS ONE 8(4): e60754. doi:10.1371/journal.pone.0060754

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Happy Mother’s Day from EveryONE!

motherandchildsculptureHaving children changes your life, your priorities and, for mothers, possibly even your brain. In pregnant women, fetal cells – which are genetically distinct from the mother’s cells – can actually establish themselves in the mother, creating a phenomenon called fetal microchimerism. Research recently published in PLOS ONE showed that fetal cells may even be able to cross the blood-brain barrier. The study found evidence of male DNA in several regions of women’s brains and cerebrospinal fluid, and a likely explanation is that this microchimerism originated when the women were pregnant with a son, although other sources are plausible. The health implications of microchimerism in the brain are not well known but for better or worse, moms seem to literally carry their children with them long after giving birth.

While not as literal as sharing cells, the mother – child bond has significant psychological implications as well.  A study of children with anxiety disorders showed that the mere proximity of a caregiver (many times a mother) decreased neural stress markers when the children were faced with a threat. The findings show that even minimal social contact with a familiar person may help regulate neural mechanisms of emotional reactivity and alleviate the stress that children with anxiety disorders feel.

Human moms aren’t the only moms out there, though. Beluga whale mothers also seem to keep their babies on their minds and vice versa, research shows. Observers monitored mother belugas with their calves and observed that calves spent the majority of time swimming and resting on the right side of their mothers (watch the videos here). This positioning allows the calves to keep their left eye on their mother and thereby analyze information on a socially significant object (mom) with the right hemisphere of their brain. The right hemisphere is the side responsible for analyzing social information, recognizing novel objects and responding to unpredictable changes in the environment, while the left side is responsible for routine behavior such as feeding. This observation highlights how important recognition of social contact is in whales, where a mother calf bond is strong and persistent.

Let’s keep moms on our minds for Mother’s Day this Sunday. Have a good one Moms!

Citations: Chan WFN, Gurnot C, Montine TJ, Sonnen JA, Guthrie KA, et al. (2012) Male Microchimerism in the Human Female Brain. PLoS ONE 7(9): e45592. doi:10.1371/journal.pone.0045592

Conner OL, Siegle GJ, McFarland AM, Silk JS, Ladouceur CD, et al. (2012) Mom—It Helps When You’re Right Here! Attenuation of Neural Stress Markers in Anxious Youths Whose Caregivers Are Present during fMRI. PLoS ONE 7(12): e50680. doi:10.1371/journal.pone.0050680

Karenina K, Giljov A, Baranov V, Osipova L, Krasnova V, et al. (2010) Visual Laterality of Calf–Mother Interactions in Wild Whales. PLoS ONE 5(11): e13787. doi:10.1371/journal.pone.0013787

Image: Mother and Child by kewl

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Color and Iridescence in the Stinkbug

fabricant figure 1 pone.0064082

“Beautiful” may not be the first word to describe the stinkbug, but Tectocoris diopthalamus sure are pretty. Pictured above are six specimens, three females (first row) and three males (second row). Do you notice a difference? Hint: it’s all in the colors.

Like mallards, narwhals, and peacocks, T. diopthalamus are sexually dimorphic, meaning that the females and males of the species look physically different. In a new study published last week in PLOS ONE, researchers state that male stinkbugs of this species are more likely than their female counterparts to have large, iridescent patches and to be a deeper shade of red. These eye-catching characteristics may help males attract females and even scare off predators. The colors are variable, however, and subject to a number of environmental factors.

In the study, the researchers used electron microscopy and pigment analysis to study how this stinkbug produces the colors you see above. They identified a type of melanin, which partly make up the blue-green iridescent patches. They also identified a nitrogen-heavy pigment called erythopterin, which produces the orange-red color.  High temperatures and a shortage of nitrogen-rich foods have the potential to affect these respective pigments and lead to a wide range of colorful variations. Neat!

 

Citation: Fabricant SA, Kemp DJ, Krajíček J, Bosáková Z, Herberstein ME (2013) Mechanisms of Color Production in a Highly Variable Shield-Back Stinkbug, Tectocoris diopthalmus (Heteroptera: Scutelleridae), and Why It Matters. PLoS ONE 8(5): e64082. doi:10.1371/journal.pone.0064082

Image: Image comes from Figure 1 of the research paper.

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Balancing nutrient diets determines how ecosystems age

FranzGround young

From rainforests to rocky glaciers, the life of an ecosystem is rooted in the balance of nutrients in its soil. Shifting levels of soil nitrogen (N) and phosphorus (P) define how ecosystems evolve, and understanding the dynamics of these key nutrients can help ecologists identify crucial factors to help mitigate climate change.

A new model to understand N and P dynamics over different time scales was described in the PLOS ONE paper, “Nitrogen and Phosphorus Limitation over Long-term Ecosystem Development in Terrestrial Ecosystems”. Recently awarded the Ecological Society of America’s prize for an outstanding theoretical ecology paper, the study determines whether N or P are more likely to limit the productivity of ecosystems over short, intermediate and long timescales. Author Duncan Menge explains the background and results of their study:

How do N and P levels change with the age of an ecosystem like a rainforest?

A good question. Levels of both N and P are very low in very young ecosystems (which typically have rocky soils; see picture above), higher in intermediate-aged ecosystems (see picture), and often lower in old ecosystems.  How N levels change relative to P, though, is a trickier subject.  The best-studied sites show relatively low N in younger ecosystems and relatively high N in older ecosystems, but there are some places that show opposing trends.

Prior to your research, how did theoretical models assess the impact of these two nutrients on ecosystem dynamics?

Prior to our work there were a series of conceptual developments, which I will call “the classic model,” but there was no previous mathematical model of N and P dynamics during long-term ecosystem development.  The classic model states that ecosystems should progress from N deficiency in younger ecosystems to P deficiency in older ecosystems, as is seen on the best-studied sites.  According to the classic model, this happens because of the differences in where N and P come from.  P is present in most rocks, whereas N is not, so P inputs are largely controlled by the weathering of rocks.  Consequently, very young ecosystems have large P inputs, whereas very old ecosystems have small P inputs.  On the other hand, N comes primarily from rain, so N inputs don’t necessarily depend on ecosystem age.

Franz500yearsite_groundYour paper mentions that these models don’t account for several possible trajectories of ecosystem evolution. What was missing? 

There are a number of missing elements that jumped out as potentially important.  First, the input side of the story isn’t as simple as “P comes from rocks, N comes from rain.”  P also comes from dust that is blown in from upwind, whereas N can also come from organisms like soybean or alder that “fix” N from the air.  Second, N and P losses from ecosystems should be as important as inputs in determining N and P levels, but these weren’t the focus of the classic model.  These facts have been known for a long time in the scientific community, but no one had looked at what their implications might be for ecosystem development.

What was your new model and how did it cover these aspects?

Our model is novel for a couple of reasons.  First, we considered a broader set of N and P input and loss dynamics than the classic model, which made for a richer set of possible ecosystem trajectories.  Second, the type of mathematical analysis we did was unlike anything previous researchers had done in this particular field, and made it possible to pin down the types of conditions that might lead to different soil conditions.

What were some of the key data accounted for in your model that were overlooked in previous analyses?

Aside from the input and loss dynamics mentioned above, one piece of data we keyed in on was that microbes in the soil have an easier time accessing P than N in dead plant material.  Again, this “preferential P mineralization” is something that has been known for a long time, but we thought that the effects of this quirk might not be fully appreciated.

What were the main findings of your analyses?

In addition to the classic “N limitation to P limitation” path, our model shows that many other trajectories are feasible.  For example, if dust deposition is high and N-fixing organisms are abundant in young ecosystems (as they often are), an ecosystem might start out P limited and end N limited.  One of the more surprising findings was that the levels of N and P in soil organic matter (mostly dead plant material) don’t necessarily correspond to N versus P limitation in an intuitive way.

What are some of the practical applications of this model- for example, for developmental activities in rainforests, or human activities planned in other ecosystems?

Whether N or P has a greater effect in an ecosystem has important implications for many environmental issues. The most important application is enhancing our climate models.  Excess N can be transformed into a greenhouse gas, whereas P cannot.  So, a better understanding of nutrient levels will improve predictions about the extent of climate change.

Congratulations to the authors on receiving an ESA award for this outstanding research paper!

Citation: Menge DNL, Hedin LO, Pacala SW (2012) Nitrogen and Phosphorus Limitation over Long-Term Ecosystem Development in Terrestrial Ecosystems. PLoS ONE 7(8): e42045. doi:10.1371/journal.pone.0042045

Photos by Duncan Menge:

top: the rocky soil of a very young ecosystem, Franz Josef glacier in New Zealand.  The rainforests in the valley formed by the Franz Josef glacier are some of the best studied ecosystem development sites in the world.

below: a rainforest on 500 year old soil near the Franz Josef glacier.

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The Rhinoceros: Saving an Icon

8526743557_5c3a36734eThe rhino is an iconic animal. With their tough demeanor and unforgettable horn, what’s not to love?

This majestic creature has been on earth more than 9.2 million years, according to a recent PLOS ONE article, where researchers describe a fossil belonging to a large two-horned rhinocerotine species in central Turkey.  This rhino was preserved in volcanic rock, a process which accounts for less than two percent of the earth’s fossils. The scientists believe an eruption similar to that of Mt. Vesuvius must be responsible for the impeccable preservation. This study gave us a sense of just how long these brilliant beasts have been among us; however their existence is in grave danger today.

Yesterday May 1st, was Save the Rhino day. The purpose of this day is to bring awareness to rhino conservation and the threats this animal faces in the wild. The rhinoceros does not have any known predators, except for us! Humans have been poaching the rhino at astounding rates for their distinctive horn. The horn is made of keratin, the same protein in our finger nails and hair, and is thought to offer health benefits in traditional medicine. The horn has also been poached for luxury items in other parts of the world.

Today, there are fewer than 29 thousand rhinos on earth, with the white rhino on the brink of extinction. In a recent PLOS ONE article, authors have investigated how potential losses in conservation efforts would affect the white rhino population in South Africa. The authors specifically looked into Kruger National Park where the rhino population increased from 1998 to 2008. Despite this increase, researchers have predicted that by 2015 more white rhinos will be poached than bred, bringing the species into a negative growth phase. Due to the high demand for rhino horns, the authors urge conservationists to find innovative approaches to curb the financial incentive driving the poaching.

Global awareness and conservation is desperately needed to ensure the rhinoceros continues to graze the earth for millions of years to come. For more research on conservation and the glorious rhinoceros, visit our site here.

 

Citations:

Citation: Antoine P-O, Orliac MJ, Atici G, Ulusoy I, Sen E, et al. (2012) A Rhinocerotid Skull Cooked-to-Death in a 9.2 Ma-Old Ignimbrite Flow of Turkey. PLoS ONE 7(11): e49997. doi:10.1371/journal.pone.0049997

Citation: Ferreira SM, Botha JM, Emmett MC (2012) Anthropogenic Influences on Conservation Values of White Rhinoceros. PLoS ONE 7(9): e45989. doi:10.1371/journal.pone.0045989

Image on Flickr by wwarby

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Some Like it Hot: Sick House Flies Purposely Induce a Fever

house fly

Fevers are thoroughly unpleasant and usually accompanied by other troublesome physical symptoms. Even so, they are often a good sign that our immune system is kicking in to help us “fight off” a nasty infection. Outside the world of endotherms (those of us that regulate our own body temperatures), some ectotherms—those that must seek heat to keep warm—also make use of fevers by finding a heat source to purposely induce them, a phenomenon known as a behavioral fever.

You might wonder why any creature, great or small, would choose to have a fever. One possible reason may be remarkably similar to the reason for fevers in humans: they help fight infections. If you weren’t aware of the massive insect-fungi war taking place right under our noses, the Cornell University Mushroom Blog says it all. In short, fungi have a terrible habit of infecting and killing all kinds of insects, and the insects’ best weapon of defense is to run to the warmest place possible. Make no mistake: the fever is not fun for the flies, and there are health risks and costs (like elevated metabolism and possible organ failure) the longer the fever is maintained. Nevertheless, it’s their best option.

In a recently published PLOS ONE paper, aptly titled “Discriminating Fever Behavior in House Flies, researchers at Penn State investigated this phenomenon further by testing whether house flies self-induced a behavioral fever in a dose-responsive manner to fungal infection. Fungus-infected flies were placed in boxes with temperature gradients (ranging from 77 to a balmy 102 degrees Fahrenheit), and their behavior was monitored throughout the course of the day.

Early in the morning, when the fungus had been actively growing all night, the flies hung out longer in the warmest parts of the box. As the flies’ increased body temperatures began to inhibit fungal growth, the flies would move to cooler areas; however, at night, the fungus would again begin to grow unabated, and the cycle would repeat. Interestingly, it was found that the higher the fungal dose, the higher the temperature of the induced fever. The researchers acknowledge that more work needs to be done, and other factors may contribute to the flies’ preference for heat. Nonetheless, this study underlines the importance and effectiveness of temperature regulation for suppressing infection in a surprising variety of species.

Citation: Anderson RD, Blanford S, Jenkins NE, Thomas MB (2013) Discriminating Fever Behavior in House Flies. PLoS ONE 8(4): e62269. doi:10.1371/journal.pone.0062269

Image Credit: Public domain

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World Malaria Day 2013: Invest in the Future: Defeat Malaria

Anopheles

Since World Malaria Day was first instituted in 2007 by World Health Organization Member States, great progress has been made in malaria prevention, detection and treatment. Even so, over half a million people die each year from this disease, many of them children under five years old, with direct costs of the disease estimated to be in excess of $12 billion annually. Today, many countries worst affected by malaria transmission are on track to meet the 2015 World Health Assembly target of reducing incidence rates by more than 75% but continued research and support are vital to keeping this momentum.

Papers published recently in PLOS ONE highlight some of the work being done around the world to reach this goal and sustain the progress that has been made. A case study of Sri Lanka’s malaria program showed how better vector control and surveillance measures can substantially reduce malaria cases, and offers insight for the development of successful disease prevention campaigns in other countries.

In addition to control and detection measures, efforts to develop inexpensive treatments and efficient ways to produce vaccines continue to be important in the fight against malaria. Medicines derived from the extract of the Artemisia plant are widely used in malaria treatment, but in a paper published in PLOS ONE last year, researchers found using the whole Artemisia plant to be effective in malaria treatment in a mouse model. They propose that whole plant treatment may even offer a more efficient delivery mechanism, potentially having broad therapeutic power against many infectious agents and the ability to dramatically reduce treatment costs.

In another study, researchers from University of California, San Diego looked for a way to make safe and effective subunit vaccines less expensive to produce. They tested whether Plasmodium falciparum surface proteins 25 and 28, both powerful malaria transmission blocking vaccine candidates, could be produced on algal chloroplasts. Their work found algae a viable, cost-effective platform for producing malaria subunit vaccines, which could be a promising contribution in making these vaccines available to low-income countries.

These papers and many others support this year’s World Malaria Day theme to “Invest in the Future: Defeat Malaria.” As researchers continue to make strides towards the 2015 Millennium Development Goal to “have halted and begun to reverse the incidence of malaria,” you can read more PLOS ONE research on malaria here.

 

Citations: 

Abeyasinghe RR, Galappaththy GNL, Smith Gueye C, Kahn JG, Feachem RGA (2012) Malaria Control and Elimination in Sri Lanka: Documenting Progress and Success Factors in a Conflict Setting. PLoS ONE 7(8): e43162. doi:10.1371/journal.pone.0043162

Elfawal MA, Towler MJ, Reich NG, Golenbock D, Weathers PJ, et al. (2012) Dried Whole Plant Artemisia annua as an Antimalarial Therapy. PLoS ONE 7(12): e52746. doi:10.1371/journal.pone.0052746

Gregory JA, Li F, Tomosada LM, Cox CJ, Topol AB, et al. (2012) Algae-Produced Pfs25 Elicits Antibodies That Inhibit Malaria Transmission. PLoS ONE 7(5): e37179. doi:10.1371/journal.pone.0037179

Image: Anopheles by James Gathany for CDC

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Tracing Our Footsteps: Archaeology in the Digital Age

pone.0060755 Geocon Bennett et al Figure 6

Human ancestors that walked the earth left few traces of their passage. Some of their footprints have lithified, or turned to stone, but some survive to this day, unlithified, in soft sediment such as silt. These fragile records of ancient footprints pose a sizable challenge to archaeologists today: how do you preserve the ephemeral? According to new research published in PLOS ONE, the answer may be to “record and digitally rescue” these footprint sites.

The authors explored two methods in this study: digital photogrammetry, where researchers strategically photograph an object in order to derive measurements; and optical laser scanning, where light is used to measure the object’s physical properties. To begin, the authors filled trays with mixtures of sand, cement, and plaster and instructed a participant to walk through these samples. Four wooden 1 cm cubes were then placed beside a select number of footprints and photographs were taken. A laser scanner was then used to measure the same footprints. This simple procedure was also replicated outside of the lab, at a beach in North West England.

In their results, they found that both methods offered similar levels of precision (though, the laser scanner was “slightly more accurate”) and that differences between the two were not statistically significant. These two methods are not, however, without their respective strengths and challenges. Photogrammetry can be an advantage in situations where records need to be taken quickly and inexpensively, as field work can be completing using a camera, tripod, and measuring equipment. This practice is, however, especially subject to human error. Additionally, the accuracy of the images – and consequently the measurements derived from the images – may be compromised by extreme lighting conditions and the depth of the footprint or impression. Alternately, laser scanning is more appropriate in conditions where a high degree of precision is required and footprints are more fragile (and thus unlikely to remain in an “optimal” condition). Laser scanners are, however, more expensive and require a large energy source. The authors advocate that both methods can, and should, be used in tandem to supplement each other.

These digital tools provide an innovative solution to preserving footprint records, especially in cases where traditional on-site, or off-site, preservation is impractical and costly. To learn more about this research and the merits and challenges of digital rescue archaeology, read the full text of the study here.

 

Image is Figure 6 of the manuscript.

Citation: Bennett MR, Falkingham P, Morse SA, Bates K, Crompton RH (2013) Preserving the Impossible: Conservation of Soft-Sediment Hominin Footprint Sites and Strategies for Three-Dimensional Digital Data Capture. PLoS ONE 8(4): e60755. doi:10.1371/journal.pone.0060755

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A Perfect Match: A Multidisciplinary Conference for the Ultimate Multidisciplinary Journal

Despite the ongoing situation in Boston, at this point the Experimental Biology 2013 conference is scheduled to begin this Sunday, and PLOS ONE is looking forward to being there to meet our authors, editors, reviewers, and anyone interested in joining the PLOS ONE community.

We’ll be at booth #547 in the Exhibitor’s Hall, Sunday through Tuesday, 9 am to 4 pm. We will also be hosting an informal meeting at the booth for editors and those interested in joining our editorial board on Monday, April 22, from 12 to 1:30. We hope to see you there!

The conference is an exciting multidisciplinary event, with a variety of participating societies that cover a wide range of biological topics, including the American Society for Biochemistry and Molecular Biology (ASBMB), American Society for Pharmacology and Experimental Therapeutics (ASPET), and the American Physiological Society (APS).

The diversity and breadth of the topics covered at the conference is a perfect match for PLOS ONE. As a multidisciplinary journal, we publish work in all the represented fields, and we are also a great venue for the interdisciplinary work this conference aims to promote. While discipline-specific journals can create artificial barriers between “traditional” research areas, PLOS ONE’s coverage of all fields of science and medicine fosters interdisciplinary research and productive collaboration between fields that might have previously been separated.

We hope to see you at booth #547. For the latest updates on the conference, please visit the conference homepage and follow @ExpBio and #EB2013 on Twitter.

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